We are part of a Sinergia consortium "Developmental engineering of endochondral ossification from mesenchymal stem cells".
Prof. Ivan Martin (Department of Biomedicine and Department of Surgery, University Hospital Basel)
Prof. Rolf Zeller (Department of Biomedicine)
Prof. Dagmar Iber (ETH Zurich, Basel)
Prof. Prasad Shastri (University of Freiburg, Germany)
As part of the project we seek to develop a mathematical model for the processes that govern endochondral ossification during embryogenesis and apply the model to the in vitro experiments to engineer bone
Prof. Ivan Martin (Department of Biomedicine and Department of Surgery, University Hospital Basel)
Prof. Rolf Zeller (Department of Biomedicine)
Prof. Dagmar Iber (ETH Zurich, Basel)
Prof. Prasad Shastri (University of Freiburg, Germany)
As part of the project we seek to develop a mathematical model for the processes that govern endochondral ossification during embryogenesis and apply the model to the in vitro experiments to engineer bone
Publications
- Tanaka S and Iber D, Inter-dependent tissue growth and Turing patterning in a model for long bone development. Physical Biology, accepted
- Tanaka S and Iber D, Simulation of a Microfluidic Gradient Generator using Lattice Boltzmann Methods. Current Synthetic and Systems Biology, in press
- Menshykau D, Germann P, Lemereux L and Iber D (2013) Simulating Organogenesis in COMSOL: Parameter Optimization for PDE-based models. Proceedings of COMSOL Conference 2013, Rotterdam
- Vollmer J, Menshykau D, and Iber D (2013) Simulating Organogenesis in COMSOL: Cell-based Signaling Models. Proceedings of COMSOL Conference 2013, Rotterdam
- Menshykau D and Iber D (2012) Simulating Organogenesis in Comsol: Deforming and Interacting Domains, Proceedings of COMSOL Conference 2012
- Iber D, Tanaka S, Fried P, Germann G and Menshykau D, Simulating Tissue Morphogenesis and Signaling. Springer Book Series: Methods in Molecular Biology. Book Title: Tissue Morphogenesis: Methods and Protocols. Editor: Celeste Nelson, in press