FUNDAMENTAL MECHANISMS
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10 KEY PUBLICATIONS
- Menshykau D et al. An Interplay of Geometry and Signaling enables Robust Lung Branching Morphogenesis, Development (2014) accepted
- Fried P and Iber D (2014) Dynamic Scaling of Morphogen Gradients on Growing Domains. Nature Communications (2014) 5, 5077
- Kurics T*, Menshykau D* and Iber D (* shared first authors) (2014) Feedbacks, receptor clustering, and receptor restriction to single cells yield large Turing spaces for ligand-receptor based Turing models. Physical Review E, 90, 022716
- Lopez-Rios J*, Duchesne A*, Speziale D, Andrey G, Peterson KA, Germann P, Ünal E, Liu J, Floriot S, Barbey S, Gallard Y, Müller-Gerbl M, Courtney AD, Klopp C, Rodriguez S, Ivanek R, Beisel C, Wicking C, Iber D, Robert B, McMahon AP, Duboule D and Zeller R (* shared first authors) (2014) Attenuated sensing of SHH by Ptch1 underlies evolution of bovine limbs. Nature, doi:10.1038/nature13289
- Bächler M*, Menshykau D*, De Geyter C and Iber D (* shared first authors) (2014) Species-specific differences in follicular antral sizes result from diffusion-based limitations on the thickness of the granulosa cell layer. Molecular Human Reproduction, 20, 208-21. The paper was awarded the SGRM (Swiss Society for Reproductive Medicine) Research Prize 2014.
- Menshykau D and Iber D (2013) Kidney Branching Morphogenesis under the control of a ligand-receptor based Turing mechanism. Phys. Biol. 10, 046003. The paper was selected as one of the Physical Biology's Highlights of 2013.
- Badugu A, Kraemer C, Germann P, Menshykau D and Iber D, Digit patterning during limb development as a result of the BMP-receptor interaction. Scientific Reports (2012), 2:991
- Menshykau D, Kraemer C and Iber D, Branch Mode Selection during early Lung Development. Plos Comp Biol (2012), 8, e1002377
- Iber D and Gaglia G The mechanism of sudden stripe formation during dorso-ventral patterning in Drosophila. J Math Biol (2007) 54, 179-198
- Iber D, Clarkson J, Yudkin MD and Campbell ID The mechanism of cell differentiation in Bacillus subtilis. Nature (2006) 441, 371-374
Reviews
- Iber D and Germann P (2014) How do digits emerge? - Mathematical Models of Limb Development, Birth Defects Research Part C: Embryo Today: Reviews, 102, 1-12
- Iber D and Menshykau D (2013) The Control of Branching Morphogenesis, Open Biology, 3:130088
- Iber D, Zeller R (2012) Making sense - data-based simulations of vertebrate limb development. Current Opinion in Genetics & Development
- Iber D (2011) Inferring biological mechanisms by data-based mathematical modelling: compartment-specific gene activation during sporulation in Bacillus subtilis as a test case. Advances in Bioinformatics, Article ID 124062, Special Issue: Biomedical Applications of Computational Methods: Results of the Successful Interplay between Bioinformatics and Experimental
- Iber D (2005) The mechanistic basis of compartmentalized gene expression in Bacillus subtilis Natural Computing, 4, 325-338.
Book Chapters
- Iber D, Tanaka S, Fried P, Germann G and Menshykau D Simulating Tissue Morphogenesis and Signaling, Springer Book Series: Methods in Molecular Biology. Book Title: Tissue Morphogenesis: Methods and Protocols. Editor: Celeste Nelson, in press
Editorials & Meeting Reports
- Stathopoulos A and Iber D, Studies of morphogens: keep calm and carry on. (2013) Development,140, 4119-4124